Skip to content
GitLab
Explore
Sign in
Primary navigation
Search or go to…
Project
BornAgain
Manage
Activity
Members
Labels
Plan
Issues
Issue boards
Milestones
Wiki
Code
Merge requests
Repository
Branches
Commits
Tags
Repository graph
Compare revisions
Snippets
Build
Pipelines
Jobs
Pipeline schedules
Artifacts
Deploy
Releases
Package registry
Container Registry
Model registry
Operate
Environments
Terraform modules
Monitor
Incidents
Service Desk
Analyze
Value stream analytics
Contributor analytics
CI/CD analytics
Repository analytics
Model experiments
Help
Help
Support
GitLab documentation
Compare GitLab plans
Community forum
Contribute to GitLab
Provide feedback
Terms and privacy
Keyboard shortcuts
?
Snippets
Groups
Projects
Show more breadcrumbs
mlz
BornAgain
Commits
b127b422
Commit
b127b422
authored
1 year ago
by
Wuttke, Joachim
Browse files
Options
Downloads
Patches
Plain Diff
provide and use DataUtil::Array::flatten2D
parent
29f564e3
No related branches found
No related tags found
1 merge request
!1979
consolidate Datafield related code
Changes
2
Hide whitespace changes
Inline
Side-by-side
Showing
2 changed files
Device/Data/ArrayUtil.cpp
+29
-29
29 additions, 29 deletions
Device/Data/ArrayUtil.cpp
Device/Data/ArrayUtil.h
+3
-1
3 additions, 1 deletion
Device/Data/ArrayUtil.h
with
32 additions
and
30 deletions
Device/Data/ArrayUtil.cpp
+
29
−
29
View file @
b127b422
...
@@ -19,17 +19,35 @@
...
@@ -19,17 +19,35 @@
#include
"Device/Data/Datafield.h"
#include
"Device/Data/Datafield.h"
#include
<stdexcept>
#include
<stdexcept>
std
::
pair
<
size_t
,
size_t
>
DataUtil
::
Array
::
getShape
(
const
std
::
vector
<
std
::
vector
<
double
>>&
data
)
std
::
pair
<
size_t
,
size_t
>
DataUtil
::
Array
::
getShape
(
const
std
::
vector
<
std
::
vector
<
double
>>&
vec
)
{
{
size_t
nrows
=
data
.
size
();
size_t
nrows
=
vec
.
size
();
size_t
ncols
(
0
);
size_t
ncols
(
0
);
if
(
nrows
)
if
(
nrows
)
ncols
=
data
[
0
].
size
();
ncols
=
vec
[
0
].
size
();
for
(
size_t
row
=
0
;
row
<
nrows
;
row
++
)
for
(
size_t
row
=
0
;
row
<
nrows
;
row
++
)
ASSERT
(
data
[
row
].
size
()
==
ncols
);
ASSERT
(
vec
[
row
].
size
()
==
ncols
);
return
std
::
make_pair
(
nrows
,
ncols
);
return
std
::
make_pair
(
nrows
,
ncols
);
}
}
std
::
tuple
<
size_t
,
size_t
,
std
::
vector
<
double
>>
DataUtil
::
Array
::
flatten2D
(
const
std
::
vector
<
std
::
vector
<
double
>>&
vec
)
{
size_t
nrows
=
vec
.
size
();
size_t
ncols
(
0
);
if
(
nrows
)
ncols
=
vec
[
0
].
size
();
std
::
vector
<
double
>
outvec
(
nrows
*
ncols
);
for
(
size_t
row
=
nrows
-
1
;
row
!=
(
size_t
)
-
1
;
--
row
)
{
ASSERT
(
vec
[
row
].
size
()
==
ncols
);
for
(
size_t
col
=
0
;
col
<
ncols
;
++
col
)
// TODO: why do we need to shuffle cols and rows and reverse row order?
outvec
[
nrows
-
row
-
1
+
col
*
nrows
]
=
vec
[
row
][
col
];
}
ASSERT
(
outvec
.
size
()
==
nrows
*
ncols
);
return
{
nrows
,
ncols
,
outvec
};
}
std
::
unique_ptr
<
Datafield
>
DataUtil
::
Array
::
createPField1D
(
const
std
::
vector
<
double
>&
vec
)
std
::
unique_ptr
<
Datafield
>
DataUtil
::
Array
::
createPField1D
(
const
std
::
vector
<
double
>&
vec
)
{
{
const
size_t
N
=
vec
.
size
();
const
size_t
N
=
vec
.
size
();
...
@@ -50,39 +68,21 @@ std::unique_ptr<Datafield>
...
@@ -50,39 +68,21 @@ std::unique_ptr<Datafield>
DataUtil
::
Array
::
createPField2D
(
const
std
::
vector
<
std
::
vector
<
double
>>&
vec
,
DataUtil
::
Array
::
createPField2D
(
const
std
::
vector
<
std
::
vector
<
double
>>&
vec
,
const
std
::
vector
<
std
::
vector
<
double
>>&
stdv
)
const
std
::
vector
<
std
::
vector
<
double
>>&
stdv
)
{
{
auto
shape
=
DataUtil
::
Array
::
getShape
(
vec
);
const
auto
[
nrows
,
ncols
,
outvec
]
=
flatten2D
(
vec
);
const
size_t
nrows
=
shape
.
first
;
const
size_t
ncols
=
shape
.
second
;
ASSERT
(
nrows
>
0
);
ASSERT
(
nrows
>
0
);
ASSERT
(
ncols
>
0
);
ASSERT
(
ncols
>
0
);
const
size_t
N
=
nrows
*
ncols
;
std
::
vector
<
const
Scale
*>
axes
{
newEquiDivision
(
"axis0"
,
ncols
,
0.0
,
(
double
)
ncols
),
std
::
vector
<
const
Scale
*>
axes
{
newEquiDivision
(
"axis0"
,
ncols
,
0.0
,
(
double
)
ncols
),
newEquiDivision
(
"axis1"
,
nrows
,
0.0
,
(
double
)
nrows
)};
newEquiDivision
(
"axis1"
,
nrows
,
0.0
,
(
double
)
nrows
)};
ASSERT
(
vec
.
size
()
==
nrows
);
std
::
vector
<
double
>
out
(
N
);
for
(
size_t
row
=
0
;
row
<
nrows
;
++
row
)
{
ASSERT
(
vec
[
row
].
size
()
==
ncols
);
for
(
size_t
col
=
0
;
col
<
ncols
;
++
col
)
{
size_t
iout
=
nrows
-
row
-
1
+
col
*
nrows
;
out
[
iout
]
=
vec
[
row
][
col
];
}
}
if
(
stdv
.
empty
())
if
(
stdv
.
empty
())
return
std
::
make_unique
<
Datafield
>
(
std
::
move
(
axes
),
out
);
return
std
::
make_unique
<
Datafield
>
(
std
::
move
(
axes
),
out
vec
);
ASSERT
(
stdv
.
size
()
==
nrows
);
const
auto
[
nrows2
,
ncols2
,
outvec2
]
=
flatten2D
(
stdv
);
std
::
vector
<
double
>
outerr
(
N
);
ASSERT
(
nrows2
==
nrows
);
for
(
size_t
row
=
0
;
row
<
nrows
;
++
row
)
{
ASSERT
(
ncols2
==
ncols
);
ASSERT
(
stdv
[
row
].
size
()
==
ncols
);
for
(
size_t
col
=
0
;
col
<
ncols
;
++
col
)
{
return
std
::
make_unique
<
Datafield
>
(
std
::
move
(
axes
),
outvec
,
outvec2
);
size_t
iout
=
nrows
-
row
-
1
+
col
*
nrows
;
outerr
[
iout
]
=
stdv
[
row
][
col
];
}
}
return
std
::
make_unique
<
Datafield
>
(
std
::
move
(
axes
),
out
,
outerr
);
}
}
std
::
vector
<
double
>
DataUtil
::
Array
::
createVector1D
(
const
Datafield
&
data
)
std
::
vector
<
double
>
DataUtil
::
Array
::
createVector1D
(
const
Datafield
&
data
)
...
...
This diff is collapsed.
Click to expand it.
Device/Data/ArrayUtil.h
+
3
−
1
View file @
b127b422
...
@@ -28,7 +28,9 @@ class Datafield;
...
@@ -28,7 +28,9 @@ class Datafield;
namespace
DataUtil
::
Array
{
namespace
DataUtil
::
Array
{
//! Returns shape nrows, ncols of 2D array.
//! Returns shape nrows, ncols of 2D array.
std
::
pair
<
size_t
,
size_t
>
getShape
(
const
std
::
vector
<
std
::
vector
<
double
>>&
data
);
std
::
pair
<
size_t
,
size_t
>
getShape
(
const
std
::
vector
<
std
::
vector
<
double
>>&
);
std
::
tuple
<
size_t
,
size_t
,
std
::
vector
<
double
>>
flatten2D
(
const
std
::
vector
<
std
::
vector
<
double
>>&
);
std
::
unique_ptr
<
Datafield
>
createPField1D
(
const
std
::
vector
<
double
>&
vec
);
std
::
unique_ptr
<
Datafield
>
createPField1D
(
const
std
::
vector
<
double
>&
vec
);
std
::
unique_ptr
<
Datafield
>
createPField1D
(
const
std
::
vector
<
double
>&
vec
,
std
::
unique_ptr
<
Datafield
>
createPField1D
(
const
std
::
vector
<
double
>&
vec
,
...
...
This diff is collapsed.
Click to expand it.
Preview
0%
Loading
Try again
or
attach a new file
.
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Save comment
Cancel
Please
register
or
sign in
to comment