Error on populating the cache (probably related to gene-data from Allen Brain API)
Will retrieve a list of gene acronyms from Allen Atlas now.
This may take a minute.
Traceback (most recent call last):
File "aioserver.py", line 25, in <module>
import brainscapes
File "/webjugex/brainscapes/brainscapes/__init__.py", line 24, in
<module>
from .atlas import REGISTRY as atlases
File "/webjugex/brainscapes/brainscapes/atlas.py", line 21, in <module>
from . import parcellations, spaces, features, logger
File "/webjugex/brainscapes/brainscapes/features/__init__.py", line
30, in <module>
extractor_types,gene_names,modalities = __init__()
File "/webjugex/brainscapes/brainscapes/features/__init__.py", line
22, in __init__
from .genes import AllenBrainAtlasQuery
File "/webjugex/brainscapes/brainscapes/features/genes.py", line 65,
in <module>
class AllenBrainAtlasQuery(FeatureExtractor):
File "/webjugex/brainscapes/brainscapes/features/genes.py", line 123,
in AllenBrainAtlasQuery
+"This may take a minute."))
File "/usr/local/lib/python3.7/json/__init__.py", line 348, in loads
return _default_decoder.decode(s)
File "/usr/local/lib/python3.7/json/decoder.py", line 337, in decode
obj, end = self.raw_decode(s, idx=_w(s, 0).end())
File "/usr/local/lib/python3.7/json/decoder.py", line 355, in raw_decode
raise JSONDecodeError("Expecting value", s, err.value) from None
json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0)
Happens quite seldom, but we should maybe catch the error if it happens.