after the big rename, update @file lines using sc-intern/edit-scripts/update-fname.py

core/def/def_alg.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_alg.h
+//! @file      core/def/def_alg.h
 //! @brief     Defines idiomatic loops (for_int, ...) and ONLY_ONCE
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_cmp.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_cmp.h
+//! @file      core/def/def_cmp.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_cmp_impl.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_cmp_impl.h
+//! @file      core/def/def_cmp_impl.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_debug.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_debug.h
+//! @file      core/def/def_debug.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_exc.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_exc.cpp
+//! @file      core/def/def_exc.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_exc.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_exc.h
+//! @file      core/def/def_exc.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_gsl.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_gsl.cpp
+//! @file      core/def/def_gsl.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_gsl.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_gsl.h
+//! @file      core/def/def_gsl.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/def_macros.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/def_macros.h
+//! @file      core/def/def_macros.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/defs.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/defs.cpp
+//! @file      core/def/defs.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/def/defs.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/def/defs.h
+//! @file      core/def/defs.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/io/io_caress.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      io/io_caress.cpp
+//! @file      core/io/io_caress.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/io/io_io.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      io/io_io.cpp
+//! @file      core/io/io_io.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/io/io_io.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      io/io_io.h
+//! @file      core/io/io_io.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/io/io_mar.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      io/io_mar.cpp
+//! @file      core/io/io_mar.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/io/io_tiff.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      io/io_tiff.cpp
+//! @file      core/io/io_tiff.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/typ/typ_angles.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/typ/typ_angles.cpp
+//! @file      core/typ/typ_angles.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/typ/typ_angles.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/typ/typ_angles.h
+//! @file      core/typ/typ_angles.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/typ/typ_array2d.cpp

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/typ/typ_array2d.cpp
+//! @file      core/typ/typ_array2d.cpp
 //! @brief     Implements ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2

core/typ/typ_array2d.h

@@ -2,7 +2,7 @@
 //
 //  Steca2: stress and texture calculator
 //
-//! @file      lib/typ/typ_array2d.h
+//! @file      core/typ/typ_array2d.h
 //! @brief     Defines ...
 //!
 //! @homepage  https://github.com/scgmlz/Steca2