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Refine incident wave vector before peak prediction

Raza, Zamaan requested to merge refine_ki into develop
  • Refinement uses real space residual, number of batches = number of frames.
  • also fixed a segfault on MacOS that seems to only happen on my MacBook.
  • This refinement can't be done right after peak finding because the peaks are not indexed. We may need to come up with a residual that doesn't involve the Miller index, only the detector coordinates.

Resolves #345 (closed)

Edited by Raza, Zamaan

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