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INM7
tools
htcondor-templates
Commits
5f3a30bb
Commit
5f3a30bb
authored
Mar 24, 2020
by
Alex Waite
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fmriprep: fix log file names
Thanks to jkroell :-)
parent
b3c44f9f
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fmriprep/gen_submit.sh
fmriprep/gen_submit.sh
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fmriprep/gen_submit.sh
View file @
5f3a30bb
#!/bin/bash
# v1.
1
# v1.
2
CPUS
=
'1'
RAM
=
'8G'
...
...
@@ -35,8 +35,8 @@ for sub in sub-{01..36}; do
--work-dir /tmp
\
${
BIDS_DIR
}
${
OUTPUT_DIR
}
participant
\
--participant-label
${
sub
}
\n
"
printf
"log =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
sub-
${
sub
}
.log
\n
"
printf
"output =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
sub-
${
sub
}
.out
\n
"
printf
"error =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
sub-
${
sub
}
.err
\n
"
printf
"log =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
${
sub
}
.log
\n
"
printf
"output =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
${
sub
}
.out
\n
"
printf
"error =
${
LOGS_DIR
}
/
\$
(Cluster).
\$
(Process).
${
sub
}
.err
\n
"
printf
"Queue
\n\n
"
done
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