Explore projects

A software to simulate and fit neutron and x-ray reflectometry and scattering at grazing incidence (GISANS and GISAXS), using distorted-wave Born approximation (DWBA).

Automatic Tissue Labeling System (ATLAS)

Forking for operation

Tools and scripts for reconstruction of the BigBrain dataset.

My standard environment for Deep Learning with 3D-PLI data on the JSC systems

Collection of dotfiles for various systems

Interactive user interface for ATLaS.

Experiments for the 2021 MICCAI paper "2D histology meets 3D topology: Cytoarchitectonic brain mapping with Graph Neural Networks"

Example idp installation via ansible

A domain specific language to describe neuron models in NEST