hopsy merge requestshttps://jugit.fz-juelich.de/IBG-1/ModSim/hopsy/-/merge_requests2024-01-22T01:35:39+01:00https://jugit.fz-juelich.de/IBG-1/ModSim/hopsy/-/merge_requests/76Resolve "fix parallel sampling with equality constraints"2024-01-22T01:35:39+01:00Jadebeck, Johann FredrikResolve "fix parallel sampling with equality constraints"Closes #120Closes #120https://jugit.fz-juelich.de/IBG-1/ModSim/hopsy/-/merge_requests/30Resolve "Allow n_threads kw arg"2022-12-14T17:39:40+01:00Stratmann, AntonResolve "Allow n_threads kw arg"Closes #51Closes #51Stratmann, AntonStratmann, Antonhttps://jugit.fz-juelich.de/IBG-1/ModSim/hopsy/-/merge_requests/29Resolve "State is not copied for parallel chains"2022-12-13T12:05:30+01:00Stratmann, AntonResolve "State is not copied for parallel chains"Closes #50Closes #50Stratmann, AntonStratmann, Antonhttps://jugit.fz-juelich.de/IBG-1/ModSim/hopsy/-/merge_requests/24Resolve "Error importing hopsy" on windows2022-10-19T11:30:42+02:00Jadebeck, Johann FredrikResolve "Error importing hopsy" on windowsCloses #44
Fixes included are:
- hops&hopsy now buildable without mpi again
- remove openmp from hops (not used in hopsy)
- remove hdf5 and sbml input&output from hops (not used in hopsy, but could lead to the error importing hopsy)
...Closes #44
Fixes included are:
- hops&hopsy now buildable without mpi again
- remove openmp from hops (not used in hopsy)
- remove hdf5 and sbml input&output from hops (not used in hopsy, but could lead to the error importing hopsy)
- fix serialization of rng for hopsy
- update hopsy markovchain to work with new ModelMixin class (no changes to outside, but now hopsy will work with RJMCMC going forward)
- Remove step size from AM (it was a bug, that AM proposal had step-size)
- Remove has_stepsize from proposal-interface
TODO once merged: build wheels for PyPI.
@r.paul There should be no breaking changes to hopsy users. Therefore it should either be a patch or a minor. Since ModelMixin was updated, we can put it as a minor version. What do you think?